RNA extraction, cDNA synthesis and quantitative reverse transcrip

RNA extraction, cDNA synthesis and quantitative reverse transcription PCR Total RNA was extracted from samples using TRIzol reagent, according to the manufacturers instructions. First strand cDNA was generated from 100 to 300 ng RNA using the Quanti Tect Reverse Transcription kit, which provides AZD9291 clinical trial an initial step to eliminate genomic DNA. The samples were diluted and 115 of this mixture was quantified in subsequent PCR reactions using PerfeCTa SYBR Green SuperMix. Samples were analyzed using the Rotor Gene Q and the corre sponding software. Relative gene expression was calcu lated using the Ct method, and all samples were normalized to glyceraldyhyde 3 phosphate dehydrogen ase. All averages S. D. are displayed as fold changes relative to gene levels at d0 or to GFP control cells, depending on the experiment.

Primer pairs were derived from the PrimerBank or from previous publications, and are listed in Additional file 3 Table S2. Measurement of H2O2 using Amplex Red Hydrogen peroxide Inhibitors,Modulators,Libraries production was determined using an Amplex Red kit, according to the manufacturers instructions. In the presence of peroxid ase, Amplex Red reagent reacts with Inhibitors,Modulators,Libraries H2O2 to produce a red fluorescent product called resoruffin. The high extinction coefficient of resoruffin allows for analysis either fluorometrically or spectro photometrically. Aliquots of medium were subsequently removed and analyzed spectrophotometrically at a wave length of 560 nm. After H2O2 determination, samples were washed thoroughly and corrected for cell number using a CytoSelect colormetric assay kit.

Dye from the stained cells was extracted and quantified at OD 560 nm. Statistical analysis Where primary myoblasts were quantified by micros copy for a given antigen, Inhibitors,Modulators,Libraries cells from at least 10 random fields were counted and scored. Primary myoblasts from at least three mice were analysed. Images were opti mized and assembled into figures using Adobe Illustra tor. In order to determine the fusion index, the number of structures containing 2 or more nuclei were analysed from at least three separate mice. The fusion index was calculated as In overexpression experiments, GFP cells were Inhibitors,Modulators,Libraries counted for quantification and fusion was calculated as P 0. 05 was considered significantly different between conditions, and was calculated using a Students t test.

Introduction Colorectal cancer Inhibitors,Modulators,Libraries is the second most common cause of cancer death in the West and its incidence in China has increased rapidly during the past few dec ades. Colorectal cancers can be divided into tumors exhibiting chromosomal instability and tumors exhibit ing microsatellite instability. In the last few years, molecular these biology advances have led to a growing knowledge of the mechanisms underlying CRC develop ment, including the mutational activation of oncogenes and alteration of several tumor suppressor genes, such as adenomatous polyposis coli, deleted in color ectal cancer and p53.

Leave a Reply

Your email address will not be published. Required fields are marked *

*

You may use these HTML tags and attributes: <a href="" title=""> <abbr title=""> <acronym title=""> <b> <blockquote cite=""> <cite> <code> <del datetime=""> <em> <i> <q cite=""> <strike> <strong>