e mirror-directed movements are recognized as symmetrical) Furt

e. mirror-directed movements are recognized as symmetrical). Further study is needed to clarify this effect. There are several discrepancies in the methodology for examining interhemispheric interactions, including tested muscle (thumb vs. index finger), contraction manner (static and dynamic), TMS techniques (single-pulse vs. paired-pulse), directions of forces and cursors (up–down vs. left–right), and the contribution of antagonistic muscles. In our study, bilateral thumb abductions required almost the same amount of effort. However, the

magnitude of left and right contractions this website was different in the previous experiment (Yedimenko & Perez, 2010). Thus, it remains unclear whether those different parameters account for the discrepant findings regarding interhemispheric interactions. Animal experiments demonstrated that some neurons in M1 have uncrossed motor pathways to the ipsilateral limb muscles (Edgley et al., learn more 2004; Lacroix et al., 2004; Jankowska & Stecina, 2007; Brus-Ramer et al., 2009; Yoshino-Saito et al., 2010). In line with these findings, human experiments demonstrated that an MEP can be elicited at the muscle ipsilateral to the M1 where TMS was applied (Wasserman et al., 1994; Ziemann

et al., 1999; Kagerer et al., 2003). The close latency between the ipsilateral and contralateral MEPs indicated that TMS was able to excite the ipsilateral muscle without going through a transcallosal circuit. PLEK2 Although we cannot

completely exclude the possible involvement of such uncrossed motor pathways or other subcortical mechanisms, we argue that the ipsilateral motor response obtained in the present study resulted from the transcallosal motor circuit. First, studies conducted on callosotomy patients demonstrated that the CC is essential for producing an inhibitory response in ipsilateral hand muscles, with a latency of approximately 30 ms (Meyer et al., 1995, 1998). The latency in the present study was almost identical to that in these lesion studies. Second, to generate an ipsilateral MEP consistently requires a relatively high stimulus intensity and strong activation of the muscle at which the ipsilateral MEP is evoked (Wasserman et al., 1994; Ziemann et al., 1999), and the probability of obtaining an ipsilateral MEP is muscle-dependent. For intrinsic hand muscles, an ipsilateral MEP was frequently observed in the first dorsal interosseous, but not in the APB, even at high TMS intensity and muscle activation (Ziemann et al., 1999; Jung & Ziemann, 2006). Indeed, we did not observe any ipsilateral MEP components in any of the participants (Figs 3-5). Third, our control experiment demonstrated that the magnitude of the ipsilateral inhibitory response was independent of the excitation of the crossed CST, suggesting that this inhibition was derived from supraspinal sources.

Compellingly, the strength of this alpha-band lateralisation was

Compellingly, the strength of this alpha-band lateralisation was related to the amplification of speech-related activity within the attended stream, suggesting that alpha-suppressive mechanisms were indeed involved in biasing audiospatial attention. Similarly, our group examined anticipatory alpha-band activity during a purely audiospatial task, also showing clear lateralisation of oscillatory activity over parieto-occipital scalp, suggesting that, even when no

visual events were to http://www.selleckchem.com/products/NVP-AUY922.html be anticipated, visuospatial oscillatory processes were engaged (Banerjee et al., 2011). In that study, we also compared anticipatory alpha-band processes between the audiospatial and a closely matched visuospatial paradigm. When attentional deployments to left and right space were collapsed so that the involvement of more general anticipatory alpha-band control processes

could be examined, it was clear that there was a strong focus over right parietal scalp sites for both the auditory and visual tasks. Compellingly, the topography of this activity was completely distinct between sensory modalities, such that a strong focus over medial inferior-parietal scalp was observed during visuospatial deployments, whereas a more lateral right-parietal focus was observed Smoothened antagonist for audiospatial deployments. As such, the data pointed to the involvement of distinct anticipatory alpha-band processes in both auditory and visual spatial attention deployments, Megestrol Acetate and that these were generated in sensory-specific control fields within the right parietal attention network. In agreement with these results, sensory-specific selective attentional fields within the inferior parietal sulcus complex have also been recently shown, using functional neuroimaging, where auditory spatial control regions were found to be more lateral than visual control regions (Kong et al., 2014). Lastly, in a study employing direct intracranial subdural

recordings from the lateral surface of the temporal lobe in humans performing an intersensory selective-attention task, our research group found clear evidence for locally generated auditory-cortical alpha-band activity, and for its involvement in selectively biasing auditory-cortical processing (Gomez-Ramirez et al., 2011). In that study, participants were asked to sustain their attention to either the auditory or visual modality while a constant stream of competing bisensory inputs was presented. They performed a difficult perceptual task within the attended sensory stream and we asked what the role of oscillatory activity in modulating auditory cortex would be. We found that activity in the delta band (1–2 Hz) entrained to the regular presentation rates of the task stimuli, but that the phase of delta reversed depending upon which sensory modality was to be attended on a given block of trials.

Thus, a number of terms were required to describe problems relate

Thus, a number of terms were required to describe problems related to the use of medications such as adverse drug reaction, adverse drug event, drug therapy problem and medication error. A further list of search terms was generated by referring to two key papers. The first article was a review on MRP classification systems by Van Mil et al.[24] which provided an overview and appraisal of classification

of medicine-related problems for use during the pharmaceutical care process and research in pharmacy. The second article by AbuRuz et al.[25] aimed to develop and validate a tool to classify and assess MRPs in which an MRP was referred to as ‘treatment related problem’. These two articles had also reported difficulties in identifying previous literature on MRPs DNA Damage inhibitor from databases. Each article suggested a list of search terms for ‘medicine-related problems’. The search terms reported by these articles include drug related GDC 0449 problem,[24, 25] medicine related problem,[24, 25] drug therapy problem, treatment related problem,

therapy related problem, medication error and pharmaceutical care issue.[25] The different keywords used to search for relevant articles in this review are presented in Table 1. Drug related problem(s) OR Drug therapy problem(s) OR Drug self medication OR Drug self administration OR Drug toxicity OR Adverse drug reaction OR Drug interaction OR Drug intoxication OR drug contraindication OR Adverse drug effect OR Overdose OR Polypharmacy OR Drug evaluation OR Drug dose OR Drug monitoring OR Drug safety OR Drug screening OR Drug seeking behaviour OR Drug tolerability OR Drug tolerance OR Drug use OR Drug monitoring OR Drug utilisation OR Medicine related problem(s) OR Medication error(s) OR Medication adherence OR Medication compliance OR Medication therapy management OR Therapy related problem(s) OR Treatment related problem(s)

OR Pharmaceutical care issue(s) Ethnicity OR Ethnic group(s) OR Race OR Racial group(s) OR Religion OR Religious group(s) OR Minority group(s) United Kingdom OR Great Britain OR England A further difficulty was the limited reporting of the ethnic profile of participants in previous studies. It has been argued that the under-representation however of minority ethnic groups in studies may be because participants of ethnic minorities fail to understand the importance of the research process or they are unable to participate because of language barriers.[26] However, another possible explanation would be that some researchers have not received training or do not recognise the complexity or importance of incorporating the perspective of minority populations into their research and thus assume the cultural perspective or need of the majority in the conduct of their research.[27] The articles were selected through titles and abstracts by the first author of this paper (FA).

Loss of the Bordetella bronchiseptica O-polysaccharide, which is

Loss of the Bordetella bronchiseptica O-polysaccharide, which is negatively charged because of the presence of uronic acid, rendered mutant

strains highly susceptible to various AMPs (Banemann et al., 1998). As for CPS and exopolysaccharide, O-polysaccharide has been proposed to act as a protective shield preventing AMPs from interacting with the bacterial membrane. Similarly, S. Typhimurium mutants lacking the O-polysaccharide were more susceptible to polymyxin B (Nagy et al., 2006; Ilg et al., 2009). In contrast, loss of the B. cenocepacia O-polysaccharide did not result in higher sensitivity to polymyxin B (Loutet et al., 2006), suggesting SB203580 order some heterogeneity in shielding effects between bacterial species. Polysaccharides appear to not be the only bacterial surface structures able to trap AMPs. In a recent study, curli fimbriae

expressed by UPEC were shown to bind LL-37 and increase resistance to this AMP (Kai-Larsen et al., 2010). Binding of LL-37 to both monomeric and polymeric CsgA, the major curli subunit, might be due to the overall negative charge of CsgA at physiological pH. In Gram-negative bacteria, the lipid A and core moieties of lipopolysaccharide can be covalently modified either within the OM or during GDC-0068 order lipopolysaccharide synthesis and transport to the OM. Lipopolysaccharide modifications are often regulated by environmental stimuli through two-component signaling systems. They promote virulence, modulate the TLR4-mediated inflammatory response, and confer resistance to AMPs (Miller et al., 2005). Lipopolysaccharide modifications, especially those of the lipid A moiety, were shown to largely impact bacterial resistance to AMPs by reinforcing

the OM permeability barrier and neutralizing the negative charges of lipopolysaccharide thereby preventing AMP binding (Fig. 1c). Although lipopolysaccharide modifications have been most extensively studied in S. Typhimurium, their importance Protein kinase N1 in conferring resistance to AMPs is also evident for many Gram-negative pathogens including Yersinia spp., E. coli, P. aeruginosa, and Neisseria spp. (Richards et al., 2010). PagP is an OM enzyme that transfers a palmitoyl group from phospholipids to lipid A, resulting in a hepta-acylated lipid A. In S. Typhimurium, this modification was shown to reinforce the OM permeability barrier and increase resistance to the AMPs C18G and protegrin (Guo et al., 1998). Interestingly, PagP remains dormant in the OM, and it becomes activated upon OM disruption leading to perturbation in the lipid asymmetry (Jia et al., 2004). Disruption of the OM by self-uptake of AMPs is therefore likely to be one of the signals stimulating PagP activity. Other lipopolysaccharide modifications occur at the periplasmic side of the OM prior to lipopolysaccharide transport to the OM. The arnBCADTEF operon (also known as pmrHFIJKLM operon) is responsible for the biosynthesis and transfer of L-Ara4N to the 4′phosphate of lipid A.

We thank Teiko Yamada for technical assistance with NMR spectrosc

We thank Teiko Yamada for technical assistance with NMR spectroscopy, Kazuhiko Vincristine cell line Saeki for providing cosmid clones from the ordered M. loti genomic library, and Makoto Hayashi for valuable advice on

rhizobial infection processes. This work was supported in part by a Grant-in-Aid for Scientific Research (no. 19580077) to H.M. from the Japan Society for the Promotion of Science. “
“Streptococcus mutans, a major etiological agent of dental caries, is resistant to bacitracin. Microarray analysis revealed that mbrA and mbrB, encoding a putative ATP-binding cassette transporter, are prominently induced in the presence of bacitracin. On the basis of the latest report that MbrC, a putative response regulator in a two-component signaling system, binds the promoter region of mbrA and thus regulates its transcription, we cut into the mechanism by generating a mutant MbrC (D54N-MbrC) that Seliciclib substituted asparagine for aspartate at position 54, the predicted phosphorylation site. MbrC, but not the mutant D54N-MbrC, showed affinity for a DNA probe that contained

the hypothetical mbrA promoter sequence. Furthermore, we introduced a point mutation (D54N-MbrC) into UA159; this mutant strain exhibited neither mbrA induction nor resistance in the presence of bacitracin. These data suggest that the aspartate residue at position 54 of MbrC is a promising candidate for phosphorylation in a bacitracin-sensing system and indispensable for S. mutans bacitracin resistance. Bacitracin is produced by Bacillus spp. and is known to bind tightly to the C55-isoprenyl pyrophosphate (IPP), thus preventing its interaction with a membrane-bound pyrophosphatase. During peptidoglycan synthesis, IPP is detached and dephosphorylated to C55-isoprenyl phosphate (IP) by the pyrophosphatase after the translocation of sugar–peptide units to the ends of peptidoglycan strands. In this way, IP is recycled for subsequent peptidoglycan synthesis (Siewert

& Strominger, 1967). However, the inhibition of pyrophosphatase activity by bacitracin results in a reduction in the amount of available IP. That is, the inhibition of peptidoglycan synthesis is thought to be the primary mechanism of action of bacitracin (Storm, 1974). Several possible mechanisms of bacitracin resistance MYO10 have been reported. IPP phosphatase is encoded by bacA in Escherichia coli and bcrC in Bacillus subtillis (El Ghachi et al., 2004; Bernard et al., 2005). Elevated levels of BacA or BcrC can outcompete bacitracin for phosphatase activity and thus restore the IP supply. The second is reduced IP utilization due to a lack of membrane-derived oligosaccharides, reported in an E. coli mutant (Fiedler & Rotering, 1988). The third mechanism is the shutting down of the synthesis of exopolysaccharides for which IP is required in certain Gram-negative bacteria (Pollock et al., 1994).

, 2011a, b) In Colpoda cucullus, the cells are surrounded by an

, 2011a, b). In Colpoda cucullus, the cells are surrounded by an outermost layer (ectocyst) of the cyst wall in 2–3 h after onset of encystment induction (Funatani et al., 2010). Rapamycin clinical trial In this stage, many small chromatin granules are extruded from the macronucleus to the cytoplasm to be digested (Funatani et al., 2010), and thereafter (7 h in earliest case), a large mass of chromatin is often extruded from the macronucleus (Kidder & Claff, 1938). The extruded chromatin is degraded by autophagy (Akematsu & Matsuoka, 2008; Funatani et al.,

2010). At this stage, mitochondrial membrane potential disappears (Funatani et al., 2010), indicating the arrest of mitochondrial electron transport chain activity. Thereafter, mitochondria-like organelles and cytoskeletal elements including ciliary structure are disintegrated (Funatani et al., 2010). Intracellular signaling pathways inducing the encystment of C. cucullus are activated by an inflow of Ca2+ that is promoted by an overpopulation-mediated cell-to-cell mechanical stimulation in the presence of external Ca2+ (Yamaoka et al., 2004; Maeda et al., 2005; Nutlin 3a Matsuoka et al., 2009; Asami et al., 2010; Sogame et al., 2011b). In the encystment of C. cucullus, protein phosphorylation has been suggested to be involved in signal

transduction pathways for encystment; in this case, the phosphorylation level of several proteins was shown to be enhanced prior to the beginning of encystment (within 1 h after onset of Etomidate encystment induction) (Sogame et al., 2011a, b). In vivo protein phosphorylation of these proteins also requires an increase in intracellular Ca2+ concentration (Sogame et al., 2011b). Identification of encystment-specific phosphorylated proteins and visualization of their localization are required to understand the functions of these proteins in the encystment process. In this study, therefore, the localization of phosphorylated proteins in encysting C. cucullus was examined by means of immunofluorescence microscopy, and

the results showed that they were associated with intracellular structures, including organelles. Furthermore, we isolated some phosphorylated proteins in encystment-induced C. cucullus and identify them by liquid chromatography tandem mass spectrometry (LC-MS/MS). Colpoda cucullus was cultured in a 0.05% (w/v) infusion of dried wheat leaves inoculated with bacteria (Klebsiella pneumoniae). The bacteria were cultured on agar plates containing 1.5% agar, 0.5% polypepton, 1% meat extract, and 0.5% NaCl. The cells of C. cucullus cultured for 1–2 days were washed in 1 mM Tris–HCl (pH 7.2) by centrifugation (1500 g for 2 min). To induce encystment, the cells collected by centrifugation (1500 g for 2 min) were suspended in a solution containing 1 mM Tris–HCl (pH 7.2) and 0.

A secretion assay showed the secretion of VopC in the wild type a

A secretion assay showed the secretion of VopC in the wild type and the ΔvocC strain

complemented with a vocC complementation plasmid (pvocC) (Fig. 2a). In contrast, VopC was not observed in the supernatant or the bacterial pellet of the vocC knockout strain (ΔvocC). VopL, which was also found to interact with VocC in the screening assay, was not visible in the supernatant of ∆vocC, as assayed by Western blotting using an anti-VopL antibody (Fig. 2a). Although faint bands were detected in all samples using an anti-VopL antibody, these bands were confirmed to be nonspecific using the ΔvopL mutant strain (data not shown). To evaluate the possibility that the absence of VopC in the supernatant of ∆vocC was caused by a small click here amount of VopC expressed in the bacterial

pellets, we introduced Sirolimus clinical trial a plasmid encoding vopC into the ∆vocC strain. As shown in Fig. 2a, although overexpressed VopC was detected in bacterial pellets, it was not detected in the supernatant. To examine whether VocC might be required by all T3SS systems for protein secretion, VopD1 (T3SS1 translocon) and VopD2 (T3SS2 translocon) were probed using antisera against VopD1 and VopD2, respectively. The secretion of VopD1 and VopD2 by T3SS1 or T3SS2 was observed in the vocC mutant, and a lower level of VopD1 was observed in the cell pellet of the vocC-complemented ∆vocC strain. The transcriptional regulation of T3SS2 and T3SS1 is influenced by each other, especially with the addition of bile (Gotoh et al., 2010); these results might explain our observation of a lower level of

VopD1 in the vocC-complemented ∆vocC strain. Some T3SS-associated chaperones can regulate the transcription of T3SS-associated genes (Darwin & Miller, 2001; Pilonieta & Munson, 2008). Therefore, it was possible that VocC regulated the transcription of VopC because lower levels of VopC protein were observed in the supernatant Ponatinib manufacturer and the bacterial pellet in the secretion assay. The transcriptional level of vopC in the ΔvocC strain was evaluated using semi-quantitative RT-PCR. The levels of both vopC and vopD2 were indistinguishable between wild-type and ΔvocC strains grown under T3SS-inducing conditions (Fig. 2b). Moreover, the translational level of vopC in the ∆vocC strain was evaluated using a translational fusion to amino acids 2–405 of CyaA from B. pertussis. The isogenic mutants of VopC1–30–CyaA in the wild-type and ∆vocC strains expressed a similar level of the translational fusion under the same conditions as the secretion assay (Fig. 2c). Similar transcriptional and translational levels of vopC in both wild-type and ∆vocC strains indicated that the decreased protein level of VopC in the absence of VocC might be caused by the degradation of VopC.

In summary, the improved sensory function of the non-immobilised

In summary, the improved sensory function of the non-immobilised hand following unilateral immobilisation is associated with cortical expansion, predominantly contralateral to the immobilised hand, and a redistribution of hemispheric dominance. Both cortical and clinical effects of immobilisation were identified after 72 h, suggesting rapid inter-hemispheric plasticity using existing

neural substrates. “
“Gilles de la Tourette Syndrome (GTS) is characterized by multiple motor and one or more vocal/phonic tics. Psychopathology and co-morbidity occur in approximately 80–90% of clinical cohorts. The most common psychopathologies are attention deficit hyperactivity disorder, obsessive-compulsive behaviours, obsessive-compulsive disorder, depression, anxiety and certain EPZ015666 behavioural disorders. In severe GTS patients who are refractory to medication and other therapies, deep brain stimulation (DBS) is investigated. To date there have been some 50–55 patients who have received DBS in 19 centres worldwide. Nine different brain targets in the thalamus,

the pallidum, and the ventral caudate and anterior internal capsule have been stimulated. This paper reviews critically and in detail all studies published LDK378 to date. Only two studies on just a few patients fulfil some of the evidence-based criteria. DBS for GTS is therefore still highly experimental. “
“The set size effect in visual search refers to the linear increase in response time (RT) or decrease in accuracy as the number of distractors increases. Previous human and monkey studies have

reported a correlation between set size and neural activity in the frontal eye field (FEF) and intraparietal sulcus (IPS). In a recent functional magnetic resonance imaging study, we did not observe a set size effect in the superior precentral sulcus (sPCS, thought to be the human homolog of the FEF) and IPS in an oculomotor visual search task (Ikkai et al., 2011). Our task used placeholders in the search array, along with the target Adenosine and distractors, in order to equate the amount of retinal stimulation for each set size. We here attempted to reconcile these differences with the results from a follow-up experiment in which the same oculomotor visual search task was used, but without placeholders. A strong behavioral set size effect was observed in both studies, with very similar saccadic RTs and slopes between RT and set size. However, a set size effect was now observed in the sPCS and IPS. We comment on this finding and discuss the role of these neural areas in visual search. “
“Antidepressants have many targets in the central nervous system. A growing body of data demonstrates the influence of antidepressants on glutamatergic neurotransmission.

2) Sixty representative proteins (common and unique for each str

2). Sixty representative proteins (common and unique for each strain) of the three strains were

selected and sequenced by MS but only GW-572016 cost 27 of these proteins were identified (Table 1). Interestingly, two proteins selected as unique for CECT 4600T and GR0202RD were the same, representing a hypothetical protein pVT1_26. The level of protein profile similarity within V. tapetis was calculated between pairs of strains applying the simple matching co-efficient formula. Results showed a 79% similarity between CECT 4600T and GR0202RD strains, 69% similarity between CECT 4600T and HH6087 strains, and 60% similarity between GR0202RD and HH6087 strains. These results were used to construct an un-rooted tree (Fig. 3), which showed that the GR0202RD strain was clearly more similar to CECT 4600T than to HH6087. Fragments of the 16S rRNA gene (1531 bp) and five coding-protein housekeeping genes, rpoD (535 bp), rpoA (863 bp), pyrH (540 bp), atpA (1194 bp) and recA

(789 bp), were sequenced to yield a concatenated sequence of 4090 nucleotides, which corresponded to more than 80% of the coding regions of each gene. Identities ATM/ATR phosphorylation between concatenated sequences of the three isolates were 99.4% between CECT 4600TT and GR0202RD, 98.2% between CECT 4600TT and HH6087, and 98.2% between GR0202RD and HH6087. These results indicate a higher similarity between clam isolates (CECT 4600TT and GR0202RD) than between either clam and the fish isolate (HH6087). This similarity can also be seen in the phylogenetic tree, in which clam Niclosamide isolates are closer to each other than to the fish isolate (Fig. 3). Automatic software analysis revealed differences in protein spot number, ranging from 729 spots for strain CECT 4600T to 556 spots for

strain HH6087. The similarity of protein profiles was higher between strains isolated from clam species (CECT 4600T and GR0202RD) than between these strains and the fish isolate (HH6087). Spot number and the similarity percentages between the V. tapetis strains are in agreement with those reported in previous studies for other bacterial species (Gormon & Phan-Thanh, 1995; Govorun et al., 2003; Dopson et al., 2004). The majority of proteins detected, regardless of the strain, were localized in the acidic part of the pH range studied. This finding agrees with results of other authors who observed a predominance of proteins with low pI over high pI in halophilic bacteria (Kiraga et al., 2007). The identified proteins could be related to important functions in the cells, such as 50S ribosomal protein L9, metabolic pathways, including riboflavin synthase β subunit, ribose-phosphate pyrophosphokinase and peptidyl-prolyl cis–trans isomerase B (rotamase B), as well as integrases, transcriptional regulators and ABC transporter.

, 2001) In addition, the upstream regions of atzA and atzB consi

, 2001). In addition, the upstream regions of atzA and atzB consist of an identical >7-kbp repeat starting only 5 bp upstream from the start codon of each gene. Each of these repeats contains three divergently transcribed truncated ORFs encoding incomplete subunits of pyruvate dehydrogenase, a complete IS1071 element and an additional transposase. This arrangement suggests that these genes do not contain a proper Ivacaftor molecular weight promoter region and are likely transcribed from sequences serendipitously assembled upstream from the corresponding coding sequences. In contrast to the lack of regulation

in the early genes of the pathway, detailed gene expression studies performed using Pseudomonas putida KT2442 (Franklin et al., 1981) as a surrogate

host have revealed that the atzDEF operon is subjected to a complex two-tiered cascade regulatory circuit (reviewed by Govantes et al., 2009) (Fig. 2) reminiscent of that described for the nitrogen fixation (nif) genes in Klebsiella pneumoniae. The first tier of regulation involves the transcriptional activation of the atzR gene, encoding the LTTR AtzR, by the general nitrogen control activator NtrC, as well as atzR repression by its own gene product. In turn, AtzR activates atzDEF transcription in response to two signals that act in an additive fashion: the substrate of the pathway, cyanuric acid, which is sensed directly by AtzR, and nitrogen limitation, which is transmitted to AtzR by the PII signal transduction protein GlnK. Both levels of control are connected by the reciprocal regulation between NtrC and GlnK, as GlnK regulates the activity Vismodegib chemical structure of NtrC (García-González et al., 2009) and NtrC activates the expression of GlnK (Hervás et al., 2008, 2009). Nevertheless, it is interesting that the regulation Endonuclease of atzR transcription appears to be dispensable for correct atzDEF regulation, as constitutively

synthesized AtzR supports a nearly wild-type regulatory response under a wide range of conditions (García-González et al., 2005). Regulated AtzR synthesis may nevertheless contribute to the energy economy of the cell, as shown by the fact that AtzR is produced in vivo at very low concentrations (Porrúa et al., 2009). Alternatively, strict PatzR regulation may be critical under conditions different from those tested in the laboratory. The divergent atzR-atzDEF promoter region contains all the cis-acting elements required for the regulatory cascade of the cyanuric acid utilization operon, including the PatzR and PatzDEF promoters, and the AtzR-binding site (Fig. 3). The PatzR promoter is a typical σ54-dependent promoter driving the transcription of atzR. PatzR is predicted to be a strong promoter from its similarity to the consensus σ54-RNA polymerase recognition motif (CGGCACN5-TTGCT vs. TGGCAC-N5-TTGCA) (Barrios et al., 1999).